luvblooms4u ● 2010-11-09 08:07 (5295 d 15:15 ago) Posting: # 6117 Views: 22,024 |
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Dear All Regards ![]() When a drug is administered, after absorption it reaches the systemic circulation and from there it moves to site of action or get distributed to some of the tissues (kidney, liver, Cancer cells if it is a targeted for that) and in mean time it get eliminated from systemic circulation by metabolism through liver/kidney etc. But, even the tissue where it has been distributed keeps on proliferating or growing thus increasing the number of cells available for metabolism or in other term with increase in the number of cell, the metabolic capability increases thus that may lead to increase metabolism of the drug in that specific region or tissue. My question is that
Thanks in advance Regards Luvblooms |
yjlee168 ★★★ ![]() ![]() Kaohsiung, Taiwan, 2010-11-09 21:16 (5295 d 02:06 ago) @ luvblooms4u Posting: # 6126 Views: 19,479 |
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Dear Luvblooms, I guess you're talking about time-dependent clearance here. ❝ But, even the tissue where it has been distributed keeps on proliferating or growing thus increasing the number of cells available for metabolism or in other term with increase in the number of cell, the metabolic capability increases thus that may lead to increase metabolism of the drug in that specific region or tissue. ❝ ❝ My question is that ❝ 1. Is there will be any effect on the PD out come because of the increased metabolism/ increased metabolic activity of the tissue where the drug is distributed or it is simply controlled by the systemic clearance? Yes and no. It depends on the changes of clearance (Cl). However, you may need to know when Cl is going to change (its starting time and stopping time) first. Of course, you can have as many as Cls you want, only if you need to know each Cl's starting time and stopping time to switch to different Cl. That's the difficult part. However, you figure it out from your data by plotting all data with 'Conc. vs. Time' first; and make your guess. It may take you some time to get good guess (trial-and-error). ❝ 2. Is there any PK PD model is available for the same? Not totally the same but should have a lot of similar PK/PD models. You can look for Pubmed with keyword "time-dependent clearance" or google it. ❝ 3. If no PK PD model available, what approaches one should try for to generate one. ❝ ❝ I hope someone at the forum will help me out with this as I am stuck and not finding any way out. I think you may need to create this model yourself to fit your data (needs). I would suggest that you can try ADAPT v5 (a fortran compiler required, freeware), Boomer (no compiler required, freeware), or Winnonlin (commercial), SAAM-II (commercial). Hope this can help. — All the best, -- Yung-jin Lee bear v2.9.2:- created by Hsin-ya Lee & Yung-jin Lee Kaohsiung, Taiwan https://www.pkpd168.com/bear Download link (updated) -> here |
Helmut ★★★ ![]() ![]() Vienna, Austria, 2010-11-10 04:03 (5294 d 19:19 ago) @ yjlee168 Posting: # 6131 Views: 19,184 |
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Dear Yung-jin! ❝ SAAM-II (commercial). Is SAAM-II really commercial? I think that you only have to register for the download. An alternative is WinSAAM (registration required). Another commercial software is Kinetica. You shouldn’t be that decent to keep quiet about your Java-GUI for Boomer; JGuiB – makes life easier, especially for an occasional user like myself! It is important to note that all PK(PD) software have a quite steep learning curve. ![]() If you have mastered some of the above, you are ready to start with Monolix (freeware). — Dif-tor heh smusma 🖖🏼 Довге життя Україна! ![]() Helmut Schütz ![]() The quality of responses received is directly proportional to the quality of the question asked. 🚮 Science Quotes |
yjlee168 ★★★ ![]() ![]() Kaohsiung, Taiwan, 2010-11-10 12:41 (5294 d 10:41 ago) @ Helmut Posting: # 6136 Views: 19,158 |
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Dear Helmut, ❝ Is SAAM-II really commercial? I think that you only have to register for the download. As far as I can remember, yes, SAAM-II is commercial, but they have teaching license for free. See its order form (Attachment B). ❝ An alternative is WinSAAM (registration required). ❝ Another commercial software is Kinetica. Agree. Both are very popular in the field of PK/PD modeling. ❝ You shouldn't be that decent to keep quiet about your Java-GUI for Boomer; JGuiB - makes life easier, especially for an occasional user like myself! Thank you. It is just a GUI for Boomer. ❝ It is important to note that all PK(PD) software have a quite steep learning curve. ❝ ❝ If you have mastered some of the above, you are ready to start with Monolix (freeware). Yes, I have used Monolix for a while. They are ready to release stable v3.2 soon. I have some problems to work with v3.2 (beta 2). I have contacted Monolix Developing Team. I don't know if they got similar feedback or not. Very nice program for Pop PK/PD; furthermore, it is freeware. I still stay with v3.1 R2. — All the best, -- Yung-jin Lee bear v2.9.2:- created by Hsin-ya Lee & Yung-jin Lee Kaohsiung, Taiwan https://www.pkpd168.com/bear Download link (updated) -> here |
luvblooms4u ● 2010-11-12 06:29 (5292 d 16:53 ago) @ yjlee168 Posting: # 6139 Views: 18,808 |
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Dear yjlee168:, ❝ I guess you're talking about time-dependent clearance here. Yes and No, I am a bit confused though. Actually I was trying to see the cell proliferation dependent clearance. ❝ Yes and no. It depends on the changes of clearance (Cl). However, you may need to know when Cl is going to change (its starting time and stopping time) first. Of course, you can have as many as Cls you want, only if you need to know each Cl's starting time and stopping time to switch to different Cl. That's the difficult part. However, you figure it out from your data by plotting all data with 'Conc. vs. Time' first; and make your guess. It may take you some time to get good guess (trial-and-error). Actually I am mainly looking for the Tissue metabolism related effects which may not be observed in 'Conc. vs. Time' graph.I think I am thinking in a right way!! ❝ ❝ 2. Is there any PK PD model is available for the same? ❝ Not totally the same but should have a lot of similar PK/PD models. You can look for Pubmed with keyword "time-dependent clearance" or google it. Thanks a lot. I will look for the same. ❝ I think you may need to create this model yourself to fit your data (needs). Thanks a lot for your suggestion. Let me search and try them then I will be back! Luvbloms ![]() |
SDavis ★★ ![]() UK, 2010-11-17 00:19 (5287 d 23:03 ago) @ luvblooms4u Posting: # 6152 Views: 18,862 |
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Hi LuvBlooms, You've had some great advice from Helmut et al.; some of these recorded webinars may be useful back ground; http://pharsight.com/events/eventsonline_archive.php Also if may make a small plug for my own company's training courses if you're looking for something delivered in an applied manner with WinNonlin Forthcoming meetings and training http://www.pharsight.com/training; Introduction to Phoenix v6.1: 8-10 Dec 2010, Paris, France. Introduction to Phoenix v6.x: 22-24 Feb 2011 Berlin, Germany. Introduction to Phoenix v6.x: 15-17 Mar 2011 Paris, France Introduction to Phoenix v6.x: 12-14 Apr 2011 London, UK Introduction to Phoenix v6.x: 10-12 May 2011 Amsterdam, NL. Population analysis with Phoenix v6.1 NLME : 17-19 May 2011, Paris, France. Population analysis with Phoenix v6.1 NLME : 6-7 Jun 2011, Athens, Greece (Before PAGE) 2-3 April 2011, Two-day Pre ACOP-meeting Workshop: Population Modelling with Phoenix NLME and Connect. Simon |
Helmut ★★★ ![]() ![]() Vienna, Austria, 2010-11-10 05:36 (5294 d 17:46 ago) @ luvblooms4u Posting: # 6132 Views: 19,202 |
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Dear Luvblooms! First I agree with Yung-jin’s post. I’m afraid you have to give us more information. Normally the half-life of drugs is too short to be influenced by an increasing number of cells (are you thinking about a tumor?). Exceptions are drugs with very long half-lives (let’s say, more than a week), or the patient is in true steady-state (again, I’m talking about weeks). What we see in time-dependent clearances Yung-jin mentioned are mainly following types:
Some general remarks about modeling:
Suggestions: J Gabrielsson and D Weiner — Dif-tor heh smusma 🖖🏼 Довге життя Україна! ![]() Helmut Schütz ![]() The quality of responses received is directly proportional to the quality of the question asked. 🚮 Science Quotes |
luvblooms4u ● 2010-11-12 07:31 (5292 d 15:51 ago) @ Helmut Posting: # 6140 Views: 18,822 |
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Dear HS ❝ I’m afraid you have to give us more informations. Normally the half-life of drugs is too short to be influenced by an increasing number of cells (are you thinking about a tumor?). Yes mainly for Tumor cell related metabolism!! and also for the drugs that get distributed in tissues for longer period of time. ❝ Exceptions are drugs with very long half-lives (let’s say, more than a week), or the patient is in true steady-state (again, I’m talking about weeks). Yes! That is the main area of concern ❝ Some general remarks about modeling: ❝ • Get some books. Read them. Take a vacation. Read them again. ![]() ❝ • If you really notice a change in clearance (e.g., in a multiple dose ❝ ❝ ❝ ❝ Let me try this !! ❝ ❝ Yeah This might be the approach I should look for but what if I want to see and related the metabolism in the hypothetical compartment ![]() Thanks for your suggestion!! Let me read them first and clear my thoughts then I will be back! Thanks a lot Luv!! |
Helmut ★★★ ![]() ![]() Vienna, Austria, 2010-11-13 16:47 (5291 d 06:35 ago) @ luvblooms4u Posting: # 6146 Views: 18,877 |
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Dear Luv(blooms)! One additional note: Check the time-course in a multiple dose study as suggested by Yung-jin in his first post. If you don’t see a deviation from linear PK, stop worrying about trying to fit any (!) model. If a change in clearance(s) is not reflected in plasma concentrations, no model will work (i.e. converge). Example modified from Danielsson/Weiner (4th ed. pp. 684–90), Autoinduction, two-compartment PK. ![]() Single dose study; 1 h infusion of 40 mg (bottom left). It was decided based on a simulation (top green line) to start the multiple dose study with a 1 h infusion of 120 mg as a loading dose, followed by 0.5 h infusions of 40 mg (τ = 8 h). What we see, is autoinduction which lead roughly after the second day to equilibrium of only ≈50 % of predicted from the simple model (without autoinduction). — Dif-tor heh smusma 🖖🏼 Довге життя Україна! ![]() Helmut Schütz ![]() The quality of responses received is directly proportional to the quality of the question asked. 🚮 Science Quotes |