total (pooled) variance: examples [Power / Sample Size]
Dear Nav!
Some more references and explanations.
In a parallel design we have no direct access to inter-subject variability, what we see is the total (sometimes called pooled) variability.
From a 2×2×2 crossover design we may estimate
I give you two examples from my 2×2 cross-over studies (for low/medium/high intra-subject CV) to get an impression about the lacking relationship of CV-intra/-inter/-total:2
Methyphenidate 20 mg MR single dose sprinkled, AUCt, n=12
CV-intra
CV-inter
CV-total
Paroxetine 30 mg IR steady state, AUCtau, n=32
CV-intra
CV-inter
CV-total
Lansoprazole 30 mg single dose fasting, Cmax, n=47
CV-intra
CV-inter
CV-total
I can’t see this rule of thumb of ‘CV-intra = 60% CV-inter’ to be applicable …
❝ […] But how would you get the inter-subject variability from the ANOVA for parallel design in order to calculate the sample size.
Some more references and explanations.
In a parallel design we have no direct access to inter-subject variability, what we see is the total (sometimes called pooled) variability.
From a 2×2×2 crossover design we may estimate
- intra-subject variability as
\(CV_e(\%)=100\sqrt{e^{MS_e}-1}\)
- inter-subject variability as
\(CV_s(\%)=100\sqrt{e^{(MS_s{\color{Red} -}ME_e)/2}-1}\)
- total (pooled) variability as
\(CV_p(\%)=100\sqrt{e^{(MS_s{\color{Red} +}ME_e)/2}-1}\)
- Midha KK, Ormsby ED, Hubbard JW, McKay G, Hawes EM, Gavalas L, McGilveray IJ. Logarithmic Transformation in Bioequivalence: Application with Two Formulations of Perphenazine. J Pharm Sci. 1993;82(2):138–44.
- Hauschke D, Steinijans VW, Diletti E. Presentation of the intrasubject coefficient of variation for sample size planning in bioequivalence studies. Int J Clin Pharmacol Ther. 1994;32(7):376–8.
❝ Re: 60% of inter to estimate the intra: I am a statistician and I routinely see the PK individuals taking 60% of inter to be the intra for estimating sample size for a crossover design and always wondered about the validity of the approach.
I give you two examples from my 2×2 cross-over studies (for low/medium/high intra-subject CV) to get an impression about the lacking relationship of CV-intra/-inter/-total:2
Methyphenidate 20 mg MR single dose sprinkled, AUCt, n=12
CV-intra
7.00% [=36% of inter, 34% of total] CV-inter
19.1%CV-total
20.4%Paroxetine 30 mg IR steady state, AUCtau, n=32
CV-intra
25.2% [=46% of inter, 41% of total] ≈CV-inter
55.1%CV-total
62.1%Lansoprazole 30 mg single dose fasting, Cmax, n=47
CV-intra
47.0% [=187% (!) of inter, 86% of total] CV-inter
25.1%CV-total
54.6%I can’t see this rule of thumb of ‘CV-intra = 60% CV-inter’ to be applicable …
- Intra-subject variability does not ‘disappear’ just because you made only one observation.
- See also this thread.
—
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Helmut Schütz
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Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
The quality of responses received is directly proportional to the quality of the question asked. 🚮
Science Quotes
Complete thread:
- Sample size estimation for parallel design Nav Coelho 2007-07-20 16:14 [Power / Sample Size]
- Parallel designs (total variance) Helmut 2007-07-20 16:29
- Parallel designs (total variance) Nav Coelho 2007-07-20 18:38
- CV-intra # 60% CV-inter Helmut 2007-07-22 01:17
- total (pooled) variance: examplesHelmut 2007-07-23 17:44
- total (pooled) variance: examples Nav Coelho 2007-07-23 19:58
- total (pooled) variance: examples BEQool 2023-04-18 09:59
- Higher-Order Crossovers Helmut 2023-04-20 10:19
- Higher-Order Crossovers BEQool 2023-04-21 07:53
- total (pooled) variance: examples zizou 2023-04-21 21:23
- total (pooled) variance: examples BEQool 2023-04-22 18:20
- total (pooled) variance: examples zizou 2023-04-22 21:06
- total (pooled) variance: examples BEQool 2023-04-25 10:57
- total (pooled) variance: examples zizou 2023-04-25 22:43
- total (pooled) variance: examples BEQool 2023-05-04 08:17
- total (pooled) variance: examples zizou 2023-04-25 22:43
- total (pooled) variance: examples BEQool 2023-04-25 10:57
- total (pooled) variance: examples zizou 2023-04-22 21:06
- total (pooled) variance: examples BEQool 2023-04-22 18:20
- Higher-Order Crossovers Helmut 2023-04-20 10:19
- Parallel designs (total variance) Nav Coelho 2007-07-20 18:38
- Sample size estimation for parallel design Dipesh Jayswal 2007-07-24 08:52
- Parallel designs (total variance) Helmut 2007-07-20 16:29