Exclude the subject(s) [NCA / SHAM]
❝ can you please enlighten me on the most accepted way to handle missing points around tmax?
Sorry, cards are stacked against you. I tried a lot with data imputation by PK modeling in the past, but nothing was accepted by agencies. However, if that doesn’t happen in many subjects, the loss in power when you exclude the subject(s) is generally not large (unless the number of eligible subjects becomes really small).
Examples:
library(PowerTOST)
# 2x2x2 design defaults: T/R 0.9, target power 0.8
excl <- 0.05 # fraction of excluded subjects
CV <- seq(0.15, 0.35 0.05)
x <- data.frame(CV = CV, n = NA_integer_, power = NA_real_,
elig = NA_real_, pow.elig = NA_real_, loss = NA_real_)
for (j in 1:nrow(x)) {
tmp <- sampleN.TOST(CV = CV[j], print = FALSE)
x$n[j] <- tmp[["Sample size"]]
x$power[j] <- tmp[["Achieved power"]]
x$elig[j] <- floor(x$n[j] * (1- excl))
x$pow.elig[j] <- suppressMessages(power.TOST(CV = CV[j], n = x$elig[j]))
x$loss[j] <- 100 * (1 - x$pow.elig[j] / x$power[j])
}
names(x)[4:6] <- c("eligibe", "power", "loss (%)")
print(signif(x, 4), row.names = FALSE)
CV n power eligibe power loss (%)
0.15 12 0.8305 11 0.7877 5.150
0.20 20 0.8347 19 0.8132 2.569
0.25 28 0.8074 26 0.7761 3.887
0.30 40 0.8158 38 0.7953 2.515
0.35 52 0.8075 49 0.7831 3.017
Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
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Complete thread:
- missing points around tmax Imph 2023-07-02 11:33 [NCA / SHAM]
- Exclude the subject(s)Helmut 2023-07-02 14:15
- predose sample is missing Imph 2023-07-04 10:15
- predose sample is missing Helmut 2023-07-04 10:25
- predose sample is missing dshah 2023-07-05 07:37
- predose sample is missing Helmut 2023-07-05 09:08
- predose sample is missing Imph 2023-07-06 07:07
- predose sample is missing dshah 2023-07-10 16:57
- predose sample is missing Imph 2023-07-06 07:07
- predose sample is missing Helmut 2023-07-05 09:08
- predose sample is missing Imph 2023-07-04 10:15
- missing points around tmax dshah 2023-07-03 08:25
- Exclude the subject(s)Helmut 2023-07-02 14:15