Threshold of % change? [General Statistics]
Hi Ben,
I was talking about statistical significance.
When it comes to a test, see the end of Section 1 in this post (EUFEPS workshop, Bonn, June 2013).
Well, we are using visual inspection in other areas as well. Automatic algos for selecting time points in estimating \(\small{\hat\lambda_z}\) (e.g., \(\small{R_{\textrm{adj,max}}^{2}}\), \(\small{AIC_\textrm{min}}\), \(\small{\text{TTT}}\)) quite often fail for ‘flat’ profiles (MR) or multiphasic profiles. I’m fine with selecting time points ‘manually’. Never had any problems with acceptance.
That’s actually the idea behind assessing the slope. Either we are still in the saturation phase (slope >0) or reasonably close to true steady state (slope ≈0).
Radio Yerevan answers: Based on PK, in principle yes.
But how could we do that? We design the study based on τ and t½. Hopefully we don’t use an average t½ – from the literature – but a worst case (i.e., a longer one).
$$C_\tau$$$$\small{
\begin{array}{crr}
\hline
\text{Dose} & \text{% of steady state} & \text{% Change} \\
\hline
1 & 50.00000 & - \\
2 & 75.00000 & 50.000000 \\
3 & 87.50000 & 16.666667 \\
4 & 93.75000 & 7.142857 \\
5 & 96.87500 & 3.333333 \\
6 & 98.43750 & 1.612903 \\
7 & 99.21875 & 0.793651 \\
\hline
\end{array}}$$Looks nice on paper. However, I see a problem here (maybe I’m wrong). In the regression we assess the last three pre-dose concentrations, which – to some extent – takes the inter-occasion variability into account. Of course, we may fall into the trap mentioned previously.
When we set a threshold of \(\small{x\%}\), we are essentially believing that the last two pre-dose concentrations are the true ones, right? Of course, that’s another trap.
❝ So you are essentially saying statistical relevance is not the right tool here. Agreed.
I was talking about statistical significance.
When it comes to a test, see the end of Section 1 in this post (EUFEPS workshop, Bonn, June 2013).
❝ Instead of relying on visual inspection & gut feeling (= common sense? ) …
Well, we are using visual inspection in other areas as well. Automatic algos for selecting time points in estimating \(\small{\hat\lambda_z}\) (e.g., \(\small{R_{\textrm{adj,max}}^{2}}\), \(\small{AIC_\textrm{min}}\), \(\small{\text{TTT}}\)) quite often fail for ‘flat’ profiles (MR) or multiphasic profiles. I’m fine with selecting time points ‘manually’. Never had any problems with acceptance.
❝ … can we define pharmacological relevance?
That’s actually the idea behind assessing the slope. Either we are still in the saturation phase (slope >0) or reasonably close to true steady state (slope ≈0).
❝ Is there a way to define quantitative thresholds based on the PK (or even PD?) of the compound (i.e. concentration should not change by more than x%)?
Radio Yerevan answers: Based on PK, in principle yes.
But how could we do that? We design the study based on τ and t½. Hopefully we don’t use an average t½ – from the literature – but a worst case (i.e., a longer one).
$$C_\tau$$$$\small{
\begin{array}{crr}
\hline
\text{Dose} & \text{% of steady state} & \text{% Change} \\
\hline
1 & 50.00000 & - \\
2 & 75.00000 & 50.000000 \\
3 & 87.50000 & 16.666667 \\
4 & 93.75000 & 7.142857 \\
5 & 96.87500 & 3.333333 \\
6 & 98.43750 & 1.612903 \\
7 & 99.21875 & 0.793651 \\
\hline
\end{array}}$$Looks nice on paper. However, I see a problem here (maybe I’m wrong). In the regression we assess the last three pre-dose concentrations, which – to some extent – takes the inter-occasion variability into account. Of course, we may fall into the trap mentioned previously.
When we set a threshold of \(\small{x\%}\), we are essentially believing that the last two pre-dose concentrations are the true ones, right? Of course, that’s another trap.
—
Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
The quality of responses received is directly proportional to the quality of the question asked. 🚮
Science Quotes
Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
The quality of responses received is directly proportional to the quality of the question asked. 🚮
Science Quotes
Complete thread:
- Achievement of Steady State arl_stat 2021-07-31 07:42 [General Statistics]
- Achievement of Steady State: Visual inspection & common sense Helmut 2021-07-31 10:58
- Achievement of Steady State: Visual inspection & common sense Ben 2021-08-05 08:08
- Threshold of % change?Helmut 2021-08-05 11:43
- Threshold of % change? Ben 2021-10-17 12:16
- Keep it simple Helmut 2021-10-20 12:36
- Threshold of % change? Ben 2021-10-17 12:16
- Threshold of % change?Helmut 2021-08-05 11:43
- Achievement of Steady State: Visual inspection & common sense Ben 2021-08-05 08:08
- Achievement of Steady State: Visual inspection & common sense Helmut 2021-07-31 10:58