Time above MIC (WinNonlin 5.2.1) [🇷 for BE/BA]
Dear Ace!
To be honest, it was more of try-and-error than thinking. Reading the online-help (and better: the User’s Guide) was just a little helpful. Only once I found out what WinNonlin was doing, I could understand the explanations – I’m getting old…
Yes, I would think so – especially if time points are rather ‘far’ apart.
According to WinNonlin’s User’s Guide (page 186, PDF page 204) both options should be possible to choose from; but whatever I tried always ended up lin/log…
Another nuisance: for MR formulations it would be nice to calculate the time interval, where C≥50%Cmax (Half Value Duration, HVD) or C≥75%Cmax (Plateau Time, t75%). In the ‘Therapeutic response windows’ tab WinNonlin shows in one column individual’s Cmax, but does not allow to enter a formula in the next column. So it's time for copy-and-paste…
For my two-segment absorption example it’s even worse: If I’m interested in the first and second part (like using WinNonlin’s partial area method) nothing helps but deleting the respective time points from the workbook.
If you just exclude them, WinNonlin will still present the global Cmax only.
Yesterday I downloaded Phoenix WinNonlin 6 ‘beta’ and will have a look how they ‘do’ it there. I didn’t dare to install the 156MB yet (really lots of stuff: needs M$ Visual C++ compiler and Office 2003, includes all successors of the recent version: WinNonlin, WinNonMix, IVIVC Toolkit, a new graphical engine [yes, two independent y-axes, Trellis plots!], a graphical model builder [similar to KINETICA], and, and…).
Yes, me.
I gave it a short try with a start time = 0, and got the index error again. If you go with a log-version you probably must add small dummy concentrations for values below the LLOQ.
❝ you did a hell of a job.
❝ Great thinking!
To be honest, it was more of try-and-error than thinking. Reading the online-help (and better: the User’s Guide) was just a little helpful. Only once I found out what WinNonlin was doing, I could understand the explanations – I’m getting old…
❝ Do you think that the log/linear approach for the descending part is better than the classic linear approach?
❝ As you already stated, the elimination phase is log/linear, so maybe this is more correct than the 'classic' approach.
Yes, I would think so – especially if time points are rather ‘far’ apart.
❝ Or maybe we can choose, as long as we clearly report which method we used?
According to WinNonlin’s User’s Guide (page 186, PDF page 204) both options should be possible to choose from; but whatever I tried always ended up lin/log…
Another nuisance: for MR formulations it would be nice to calculate the time interval, where C≥50%Cmax (Half Value Duration, HVD) or C≥75%Cmax (Plateau Time, t75%). In the ‘Therapeutic response windows’ tab WinNonlin shows in one column individual’s Cmax, but does not allow to enter a formula in the next column. So it's time for copy-and-paste…
For my two-segment absorption example it’s even worse: If I’m interested in the first and second part (like using WinNonlin’s partial area method) nothing helps but deleting the respective time points from the workbook.
If you just exclude them, WinNonlin will still present the global Cmax only.
Yesterday I downloaded Phoenix WinNonlin 6 ‘beta’ and will have a look how they ‘do’ it there. I didn’t dare to install the 156MB yet (really lots of stuff: needs M$ Visual C++ compiler and Office 2003, includes all successors of the recent version: WinNonlin, WinNonMix, IVIVC Toolkit, a new graphical engine [yes, two independent y-axes, Trellis plots!], a graphical model builder [similar to KINETICA], and, and…).
❝ PS: anyone interested in the full R code with an extension to choose log or not?
Yes, me.
I gave it a short try with a start time = 0, and got the index error again. If you go with a log-version you probably must add small dummy concentrations for values below the LLOQ.
—
Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
The quality of responses received is directly proportional to the quality of the question asked. 🚮
Science Quotes
Dif-tor heh smusma 🖖🏼 Довге життя Україна!
Helmut Schütz
The quality of responses received is directly proportional to the quality of the question asked. 🚮
Science Quotes
Complete thread:
- Calculation of time above MIC Aceto81 2008-06-26 16:31 [🇷 for BE/BA]
- Calculation of time above MIC Helmut 2008-06-26 18:58
- Calculation of time above MIC Aceto81 2008-06-26 21:50
- Calculation of time above MIC Helmut 2008-06-27 00:18
- Calculation of time above MIC Helmut 2008-06-29 02:24
- Calculation of time above MIC Aceto81 2008-06-30 15:50
- Therapeutic Occupancy Time / MEC Helmut 2008-06-30 16:45
- Calculation of time above MIC Aceto81 2008-06-30 15:50
- Time above MIC (WinNonlin 5.2.1) Helmut 2008-08-08 20:38
- Time above MIC (WinNonlin 5.2.1) Aceto81 2008-08-12 09:56
- Time above MIC (WinNonlin 5.2.1)Helmut 2008-08-12 12:32
- Time above MIC (R function) Aceto81 2008-08-13 11:19
- Time above MIC (R function) Helmut 2008-08-13 13:18
- Time above MIC (R function) Aceto81 2008-08-13 15:35
- Time above MIC (R function) Helmut 2008-08-13 13:18
- Phoenix-WinNonlin 6.0 released 29 May 2009 SDavis 2009-06-04 10:55
- Phoenix-WinNonlin 6.0 Helmut 2009-06-04 11:57
- Phoenix-WinNonlin 6.0 - introductory webinars SDavis 2009-06-04 18:50
- Phoenix-WinNonlin 6.0 - introductory webinars Helmut 2009-06-04 23:40
- Phoenix-WinNonlin 6.0 - introductory webinars SDavis 2009-06-04 18:50
- Phoenix-WinNonlin 6.0 Helmut 2009-06-04 11:57
- Time above MIC (R function) Aceto81 2008-08-13 11:19
- Time above MIC (WinNonlin 5.2.1)Helmut 2008-08-12 12:32
- TimeLow Astea 2017-10-28 22:15
- PHX/WNL 8.0 vs. previous releases Helmut 2017-10-28 23:20
- PHX/WNL 8.0 vs. previous releases Astea 2017-10-28 23:49
- Occupancy, Half Value Duration, Plateau Time in Phoenix/WinNonlin 8 Helmut 2017-10-30 13:18
- Occupancy, Half Value Duration, Plateau Time in Phoenix/WinNonlin 8 Astea 2017-10-31 01:12
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- Occupancy, Half Value Duration, Plateau Time in Phoenix/WinNonlin 8 Astea 2017-10-31 01:12
- PHX/WNL 8.0 vs. previous releases Helmut 2017-10-28 23:20
- Time above MIC (WinNonlin 5.2.1) Aceto81 2008-08-12 09:56
- Calculation of time above MIC Aceto81 2008-06-26 21:50
- Calculation of time above MIC Helmut 2008-06-26 18:58