PK simulation [🇷 for BE/BA]
❝ ❝ Is this correct? I think that I screwed up the analytical error. Original text:
Analytical assay errors were generated from log-normal distributions with no bias, a CV of 10%, plus a constant term equal to the product of the assay CV and the limit of quantification, LQ.
❝ ❝ Shouldn’t I rather use a normal distribution instead (AErr1 <- rnorm(n=1, mean=0, sd=abs(C[j]*AErr))
)? …
❝ I'm not quite sure If I really understand what you attempt here.
Well, reproduce the sims of the paper…
❝ But your implementation of the analytical error via log-normal distribution seems correct for me.
Really? Im not sure about
meanlog=0
since dlnorm(1)==dnorm(0)
; shouldn’t I rather use meanlog=1
?*❝ What I absolutely don't understand is the "... constant term ...". What is it good for . This is only a shift in the concentration levels constant over the whole curve and also for all simulated profiles the same, if I understand. But nothing like a random term as errors usually are deemed for.
Me too. I don't get the idea as well. Maybe it’s time to ask László.
❝ BTW: Why do you think you have screwed up something? Because the scatter in the simulated data is too smooth compared to real data .
Exactly. Also I don’t get the point why I should go with a log-normal here (noise is not necessarily positive). Analytical error is normal, IMHO.
- No big difference:
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Helmut Schütz
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Science Quotes
Complete thread:
- PK simulation Helmut 2012-03-29 18:52
- PK simulation d_labes 2012-03-30 15:38
- PK simulationHelmut 2012-03-30 15:56
- PK simulation - log-normal d_labes 2012-03-31 14:40
- Why all this fuzz? Helmut 2012-03-30 18:46
- PK simulationHelmut 2012-03-30 15:56
- PK simulation jag009 2012-03-30 20:34
- PK simulation jag009 2012-04-04 17:03
- R function rlnorm() d_labes 2012-04-05 09:15
- Lognormal vs. truncated normal Helmut 2012-04-05 14:27
- Lognormal vs. truncated normal jag009 2012-04-05 17:52
- PK simulation d_labes 2012-03-30 15:38